# Microbes AWG Oral Microbiome Subgroup **URL:** \ **Category:** Microbes AWG Open Projects\ **Tags:** project, microbiome, oral\ **Created:** [September 25, 2024, 2:54pm UTC](https://awg.osdr.space/t/microbes-awg-oral-microbiome-subgroup/1217 "2024-09-25T14:54:31Z")\ **Posts on this page:** 20\ **Page:** 2
**Author:** ![system](https://us1.discourse-cdn.com/flex001/uploads/osdr/original/2X/f/f65c1968331f2801c5d493d91535d4ec685de999.png) [@system](https://awg.osdr.space/u/system)\ **Post date:** [July 5, 2025, 5:00pm UTC](https://awg.osdr.space/t/microbes-awg-oral-microbiome-subgroup/1217/21 "2025-07-05T17:00:30Z")
Automatically bumped on July 5, 2025, 5:00pm UTC ---
**Author:** ![system](https://us1.discourse-cdn.com/flex001/uploads/osdr/original/2X/f/f65c1968331f2801c5d493d91535d4ec685de999.png) [@system](https://awg.osdr.space/u/system)\ **Post date:** [August 9, 2025, 5:00pm UTC](https://awg.osdr.space/t/microbes-awg-oral-microbiome-subgroup/1217/22 "2025-08-09T17:00:23Z")
Automatically bumped on August 9, 2025, 5:00pm UTC ---
**Author:** ![system](https://us1.discourse-cdn.com/flex001/uploads/osdr/original/2X/f/f65c1968331f2801c5d493d91535d4ec685de999.png) [@system](https://awg.osdr.space/u/system)\ **Post date:** [September 6, 2025, 5:00pm UTC](https://awg.osdr.space/t/microbes-awg-oral-microbiome-subgroup/1217/23 "2025-09-06T17:00:56Z")
Automatically bumped on September 6, 2025, 5:00pm UTC ---
**Author:** ![DirkNeefs](https://sea1.discourse-cdn.com/flex001/user_avatar/awg.osdr.space/dirkneefs/32/155_2.png) [@DirkNeefs](https://awg.osdr.space/u/DirkNeefs)\ **Post date:** [September 8, 2025, 10:19am UTC](https://awg.osdr.space/t/microbes-awg-oral-microbiome-subgroup/1217/24 "2025-09-08T10:19:27Z")
Hi, please join the meeting tomorrow. We can see what we can do ---
**Author:** ![nicholas.brereton](https://sea1.discourse-cdn.com/flex001/user_avatar/awg.osdr.space/nicholas.brereton/32/25_2.png) [@nicholas.brereton](https://awg.osdr.space/u/nicholas.brereton)\ **Post date:** [September 9, 2025, 5:06pm UTC](https://awg.osdr.space/t/microbes-awg-oral-microbiome-subgroup/1217/25 "2025-09-09T17:06:38Z")
Starting now! ---
**Author:** ![system](https://us1.discourse-cdn.com/flex001/uploads/osdr/original/2X/f/f65c1968331f2801c5d493d91535d4ec685de999.png) [@system](https://awg.osdr.space/u/system)\ **Post date:** [October 11, 2025, 5:00pm UTC](https://awg.osdr.space/t/microbes-awg-oral-microbiome-subgroup/1217/26 "2025-10-11T17:00:26Z")
Automatically bumped on October 11, 2025, 5:00pm UTC ---
**Author:** ![drtaiba](https://sea1.discourse-cdn.com/flex001/user_avatar/awg.osdr.space/drtaiba/32/2538_2.png) [@drtaiba](https://awg.osdr.space/u/drtaiba)\ **Post date:** [October 14, 2025, 5:54pm UTC](https://awg.osdr.space/t/microbes-awg-oral-microbiome-subgroup/1217/27 "2025-10-14T17:54:35Z")
Thank you for today’s meeting and the opportunity to collaborate on the manuscript led by Nicholas Brereton. ---
**Author:** ![DirkNeefs](https://sea1.discourse-cdn.com/flex001/user_avatar/awg.osdr.space/dirkneefs/32/155_2.png) [@DirkNeefs](https://awg.osdr.space/u/DirkNeefs)\ **Post date:** [October 14, 2025, 5:57pm UTC](https://awg.osdr.space/t/microbes-awg-oral-microbiome-subgroup/1217/28 "2025-10-14T17:57:59Z")
You are wellcone. Great having you! Take initiative and find your niche with us. The project with Zino and Shahnawaz seems like a great start. Contact me if needed. I like to work with whatsapp. 0032 456384773. Regards, Dirk ---
**Author:** ![DirkNeefs](https://sea1.discourse-cdn.com/flex001/user_avatar/awg.osdr.space/dirkneefs/32/155_2.png) [@DirkNeefs](https://awg.osdr.space/u/DirkNeefs)\ **Post date:** [October 14, 2025, 6:08pm UTC](https://awg.osdr.space/t/microbes-awg-oral-microbiome-subgroup/1217/29 "2025-10-14T18:08:14Z")
Hi Alavia, How is it going? ---
**Author:** ![alavia](https://sea1.discourse-cdn.com/flex001/user_avatar/awg.osdr.space/alavia/32/2000_2.png) [@alavia](https://awg.osdr.space/u/alavia)\ **Post date:** [October 15, 2025, 3:18pm UTC](https://awg.osdr.space/t/microbes-awg-oral-microbiome-subgroup/1217/30 "2025-10-15T15:18:12Z")
Hello! It’s going well. Thanks for asking. How are you doing? ---
**Author:** ![DirkNeefs](https://sea1.discourse-cdn.com/flex001/user_avatar/awg.osdr.space/dirkneefs/32/155_2.png) [@DirkNeefs](https://awg.osdr.space/u/DirkNeefs)\ **Post date:** [October 15, 2025, 6:11pm UTC](https://awg.osdr.space/t/microbes-awg-oral-microbiome-subgroup/1217/31 "2025-10-15T18:11:12Z")
Always busy. What are you on working now? Where do you want to focus on? ---
**Author:** ![system](https://us1.discourse-cdn.com/flex001/uploads/osdr/original/2X/f/f65c1968331f2801c5d493d91535d4ec685de999.png) [@system](https://awg.osdr.space/u/system)\ **Post date:** [November 8, 2025, 6:30pm UTC](https://awg.osdr.space/t/microbes-awg-oral-microbiome-subgroup/1217/32 "2025-11-08T18:30:10Z")
Automatically bumped on November 8, 2025, 6:30pm UTC ---
**Author:** ![nicholas.brereton](https://sea1.discourse-cdn.com/flex001/user_avatar/awg.osdr.space/nicholas.brereton/32/25_2.png) [@nicholas.brereton](https://awg.osdr.space/u/nicholas.brereton)\ **Post date:** [November 11, 2025, 6:13pm UTC](https://awg.osdr.space/t/microbes-awg-oral-microbiome-subgroup/1217/33 "2025-11-11T18:13:08Z")
Hi Oral Microbiome Subgroup, Dirk is flying this evening so can’t host the meeting. So we’ve provided a new meeting link - sorry for the confusion. The meeting is in 20 mins (7:30pm CEST, 6:30pm BST, 1:30pm ET, 10:30am PT, 11:00pm IST, 2:30am JST).\*\* > **[Join our Cloud HD Video Meeting](https://ucd-ie.zoom.us/j/68529379928?pwd=PESNcUtZp920KQgrlxlBBrHbKrUZSb.1)** > > Zoom is the leader in modern enterprise cloud communications. ---
**Author:** ![nicholas.brereton](https://sea1.discourse-cdn.com/flex001/user_avatar/awg.osdr.space/nicholas.brereton/32/25_2.png) [@nicholas.brereton](https://awg.osdr.space/u/nicholas.brereton)\ **Post date:** [November 11, 2025, 6:32pm UTC](https://awg.osdr.space/t/microbes-awg-oral-microbiome-subgroup/1217/34 "2025-11-11T18:32:01Z")
Meeting happening now:[](https://ucd-ie.zoom.us/j/68529379928?pwd=PESNcUtZp920KQgrlxlBBrHbKrUZSb.1)[Launch Meeting - Zoom](https://ucd-ie.zoom.us/j/68529379928?pwd=PESNcUtZp920KQgrlxlBBrHbKrUZSb.1) ---
**Author:** ![AnupamGautam](https://avatars.discourse-cdn.com/v4/letter/a/b2d939/32.png) [@AnupamGautam](https://awg.osdr.space/u/AnupamGautam)\ **Post date:** [November 11, 2025, 6:40pm UTC](https://awg.osdr.space/t/microbes-awg-oral-microbiome-subgroup/1217/35 "2025-11-11T18:40:23Z")
Hi, Are we having the meeting today? Microsoft Teams is showing a message saying that I need to wait for someone to let me in. Thanks, Anupam ---
**Author:** ![system](https://us1.discourse-cdn.com/flex001/uploads/osdr/original/2X/f/f65c1968331f2801c5d493d91535d4ec685de999.png) [@system](https://awg.osdr.space/u/system)\ **Post date:** [December 6, 2025, 6:30pm UTC](https://awg.osdr.space/t/microbes-awg-oral-microbiome-subgroup/1217/36 "2025-12-06T18:30:53Z")
Automatically bumped on December 6, 2025, 6:30pm UTC ---
**Author:** ![system](https://us1.discourse-cdn.com/flex001/uploads/osdr/original/2X/f/f65c1968331f2801c5d493d91535d4ec685de999.png) [@system](https://awg.osdr.space/u/system)\ **Post date:** [January 10, 2026, 6:00pm UTC](https://awg.osdr.space/t/microbes-awg-oral-microbiome-subgroup/1217/37 "2026-01-10T18:00:29Z")
Automatically bumped on January 10, 2026, 6:00pm UTC ---
**Author:** ![AnupamGautam](https://avatars.discourse-cdn.com/v4/letter/a/b2d939/32.png) [@AnupamGautam](https://awg.osdr.space/u/AnupamGautam)\ **Post date:** [January 10, 2026, 11:42pm UTC](https://awg.osdr.space/t/microbes-awg-oral-microbiome-subgroup/1217/38 "2026-01-10T23:42:39Z")
Dear all, As I recall from our last discussion, we planned to explore the MGnify API to identify oral microbiome–related studies. I have looked into biome categories related to the oral microbiome and its subgroups (e.g., saliva, oral cavity, etc.) and identified **161 studies** , comprising nearly **24,000 samples**. These samples span different data types, including **genome** , **amplicon** , and **metagenomic** data. They can be further filtered based on our specific requirements—for example, if we decide to focus only on metagenomic samples. I can also share the code used to extract this information via the API. Additionally, this could be converted into a GUI so that other researchers can directly use it according to their needs. We can discuss this further during the meeting and refine the filtering criteria based on the next steps and requirements. I am not sure how to upload the Excel file, as the channel does not seem to allow attachments. Is there a shared drive or link where I can upload it? Best regards, Anupam ---
**Author:** ![rtscott2001](https://sea1.discourse-cdn.com/flex001/user_avatar/awg.osdr.space/rtscott2001/32/5_2.png) [@rtscott2001](https://awg.osdr.space/u/rtscott2001)\ **Post date:** [January 11, 2026, 12:09am UTC](https://awg.osdr.space/t/microbes-awg-oral-microbiome-subgroup/1217/39 "2026-01-11T00:09:04Z")
Would be great if you want to present this project approach at the next [@MicrobesAWG](https://awg.osdr.space/groups/microbesawg) mtg in Feb or March. Do you usually attend? First Wednesday of each month @daniela.bezdan @jaume.puig @katherine.j.baxter @nicholas.brereton @ben.sikes @emmanuel.gonzalez @DirkNeefs @jonathon_baker @kirill @jgalazka @asaravia @eszter.sas @vrvinothan ---
**Author:** ![DirkNeefs](https://sea1.discourse-cdn.com/flex001/user_avatar/awg.osdr.space/dirkneefs/32/155_2.png) [@DirkNeefs](https://awg.osdr.space/u/DirkNeefs)\ **Post date:** [January 11, 2026, 9:45am UTC](https://awg.osdr.space/t/microbes-awg-oral-microbiome-subgroup/1217/40 "2026-01-11T09:45:41Z")
Hi @AnupamGautam , this is great! Yes we have a google drive, [NASA GeneLab Microbes AWG - Google Drive](https://drive.google.com/drive/folders/1fp2xnTMAvk66JKjlyUSoW-wFzPs2i3Hv?usp=sharing) You will find a folder from the oral microbiome subgroup where you can upload the drive. If there is an issue, please contact @jaume.puig . Looking forward discussing the topic! Regards, Dirk [Previous page](https://awg.osdr.space/t/microbes-awg-oral-microbiome-subgroup/1217.md?page=1) [Next page](https://awg.osdr.space/t/microbes-awg-oral-microbiome-subgroup/1217.md?page=3)