OSDR recently released updated and new tutorials for how to use and navigate the various OSDR features and tools. You can find the OSDR tutorials here:
We would love your feedback on our tutorials. Also, if there are any other tutorials that you think would be helpful, please let us know (@asaravia or @rtscott2001). Also, please use this thread with any comments, suggestions, etc
Thank you @asaravia and @rtscott2001 for the excellent OSDR tutorials to get up to speed with key concepts and start exploring different datasets available to the community.
In terms of future instructional materials I was wondering if you planned to develop or already have training materials describing how to implement your fantastic RNAseq pipeline applications on GeneLab GitHub. I couldn’t help but not the depth and scalability of all the iterative templates and solutions and would like to use your RNAseq deployment approach as template for my own project!
Sorry for the late reply. We have wrapped most of our GeneLab pipelines into workflows and provide instructions for how to install and run the workflows under the “Workflow_Documentation” section for each omics type on our GitHub repo. For example, you can find instructions for how to install and run our current RNAseq workflow on GitHub in the following location: RNAseq/Workflow_Documentation/NF_RCP-F/README.md.
We are planning to create tutorials for how to navigate our GitHub repo soon and will eventually be adding video tutorials.
In the meantime, if you have any questions about how to install or run any of our workflows please feel free to reach out to me or our Data Processing lead, @barbara.novak.
