Mining Microbial Data from Existing Plant Data

This is an effort to look at -omics data from plant space flights to parse microbial-associated molecular patterns.

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This gitbook page offers helpful project planning strategies and related information: Microbiome of seedling in space | Microbiome of seedling in space

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Is this going to be discussed at this upcoming Wednesday’s @MicrobesAWG mtg 1st Wednesday/mo 10a-11a PT? @daniela.bezdan @ben.sikes @dr.richard.barker

I don’t know that we have set an agenda for the meeting @rtscott2001. @daniela.bezdan was traveling I know and we needed to cancel our last meeting. I would be happy to give an update on this project if desired. @dr.richard.barker and @Zerrin, would you be willing to go through some of your results during the meeting as well? Combined, this might take up a big chunk of the meeting so maybe I should wait to see if @daniela.bezdan already has a plan for the meeting (perhaps rescheduled from last time)?

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Sure, i haven’t heard from @daniela.bezdan, so always happy to adapt to her plans ( :slight_smile: ) but note I am happy to provide a little update on @Zerrin’s analysis (&/or support Zerrin’s presentation of it if time zones allow). Note, that it’s still preliminary data and is an ongoing analysis but I think it’s about to reach a “reflection point”, so even though the final narrative is not complete I still believe it will be useful to discuss to help identify loose ends and potential solutions. Cheers, DRB

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It’s Noted. Thank you.

Dr. Ramkishor Sah, PPHC, PhD (Ophthalmology)
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Is there a way to keep track of the meetings? I am in a couple of AWG groups but I don’t have a calendar of scheduled meetings.

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For the moment, all the meeting times are listed in The AWG Member Hub

But you raise a very good point. This Forum-Space does HS the ability to enable a calendar plugin. I need to read more and get that dialed in. Someone else raised the idea too @rachelrgilbert so now that I hear that from you as well, that tells me it would helps

Thank you!

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Hi @nicholas.brereton @ben.sikes - sorry I was only able to briefly join the meeting on this project yesterday.

What was the outcome?

No worries, @rtscott2001. I was late because of a kidmergency but all good. We had a good discussion about the science and process we want to move forward with. For the Open Life Science pages here, did you have insights on how better we can organize a collaborative topic/project like this Plant-Microbe AWG one? We currently have a lot of different ways we are communicating and I’m worried about overload/loss. For example, I’m polling to schedule meetings with WhenIsGood, we’re using Google Drive for data, papers, and meeting minutes collection, @dr.richard.barker has taken a good bit of what we’ve done and put it in GitBook alongside early results. How do you think this communication tool can help in all that?

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Shoot. Yeah, as much as possible I’d suggest leveraging this thread, but also keeping the “AWG Group Member Hub” updated: Open Science Data Repository AWG Community

Microbe: https://awg.osdr.space/g/MicrobesAWG
Plant: https://awg.osdr.space/g/PlantAWG

As the AWG overall (just about 600 now), climbs towards 1000, we’re really hoping (and day by day confident), this forum-space will be the central place for general communications – BUT where GitHubs, google docs, etc can be shared.

There is a polling/voting option on meeting times here in Discourse. But I havent used it yet (calendar icon)

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Hi, I would like to be added here. Adrian Guzman

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